The review places new scrutiny on the Beirut-based airline, which has continued operating throughout Lebanon’s economic crisis and ongoing regional conflict while many foreign carriers reduced or suspended flights across parts of the Middle East.

The audit follows complaints from the International Federation of Air Line Pilots’ Associations (IFALPA), which warned that civilian aircraft were being flown in proximity to military activity, including Israeli airstrikes near Beirut’s airport. IFALPA President Ron Hay described such operations as posing unacceptable risks to passengers and crews.

Lebanon’s Civil Aviation Authority said it initiated a safety review and entered discussions with MEA regarding the concerns. The regulator said the audit process remains ongoing, although preliminary oversight inspections conducted between May 18 and June 1 found the airline compliant with regulatory and operational safety requirements.

MEA rejected the allegations, citing its strong safety record and stating that all flights during hostilities were conducted under risk assessments developed with Lebanese authorities and aviation regulators. The airline also denied claims that pilot training assignments were used as disciplinary measures against those reporting safety issues.

The dispute has drawn attention from international aviation groups and airline partners. Pilot associations informed members of the SkyTeam alliance, which includes carriers such as Air France and Delta Air Lines, about the concerns. Both airlines said safety oversight of partner carriers remains a priority.

Additional questions were raised over financial support provided by MEA to aviation sector employees during Lebanon’s financial collapse.

Pilot groups argued the payments could create perceptions of conflicts of interest in regulatory oversight, while the airline said the support was coordinated with government authorities to maintain critical aviation infrastructure and did not affect the regulator’s independence.